Bioinformatics With Rust
Introduction
Why Rust?
About AI
Prerequisites
Getting Started
Rust Basics
File Formats
Nucleotides
The Basics Of Alignment
Kmers
1. A first implementation
2. Using Phred Scores
3. Bit Shift Encoding
5. SIMD Vectorization
6. FracMinHash
7. Minimizers
8. Syncmers
Aminoacids
1. Translation
Amplicon
1. In Silico PCR
2. Clustering
3. Classification
Practicals
Blueprints
Resources
Thank You
TODO

Bioinformatics with Rust

Bioinformatics With Rust

Welcome to Bioinformatics with Rust! An unofficial book aimed at introducing the Rust programming language for bioinformatic applications.